STRINGSTRING
Solyc06g005990.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g005990.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g005990.2.1Uncharacterized protein (1361 aa)    
Predicted Functional Partners:
Solyc04g082980.1.1
Uncharacterized protein (1053 aa)
     
 
  0.952
Solyc10g018520.1.1
Uncharacterized protein (861 aa)
     
  0.945
Solyc08g066700.2.1
Uncharacterized protein (232 aa)
     
  0.815
Solyc10g039190.1.1
Uncharacterized protein (950 aa)
     
    0.807
Solyc09g018530.1.1
Uncharacterized protein (159 aa)
     
    0.807
Solyc09g018520.1.1
Uncharacterized protein (131 aa)
     
    0.807
Solyc03g093480.2.1
Uncharacterized protein (2149 aa)
     
 
    0.797
Solyc12g035870.1.1
Uncharacterized protein (398 aa)
     
  0.770
Solyc07g039550.2.1
Uncharacterized protein (1190 aa)
     
  0.757
Solyc01g110990.2.1
Uncharacterized protein (1111 aa)
     
  0.757
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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