STRINGSTRING
AS1 protein (Solanum lycopersicum) - STRING interaction network
"AS1" - Asparagine synthetase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS1Asparagine synthetase (590 aa)    
Predicted Functional Partners:
Solyc10g075170.1.1
Uncharacterized protein (368 aa)
     
 
  0.946
Solyc08g068330.2.1
Aspartate aminotransferase (452 aa)
     
 
  0.946
Solyc08g041870.2.1
Aspartate aminotransferase (462 aa)
     
 
  0.946
Solyc07g055210.2.1
Aspartate aminotransferase (425 aa)
     
 
  0.946
ASS
Argininosuccinate synthase (494 aa)
     
  0.939
Solyc11g040390.1.1
Uncharacterized protein (819 aa)
   
 
  0.918
Solyc06g064550.2.1
Uncharacterized protein (919 aa)
   
 
  0.918
Solyc11g006350.1.1
Aspartate carbamoyltransferase (377 aa)
       
  0.916
Solyc10g080320.1.1
Adenylosuccinate synthetase ; Plays an important role in the de novo pathway of purine nucleotide biosynthesis (507 aa)
     
 
  0.909
Solyc02g085520.2.1
Adenylosuccinate synthetase ; Plays an important role in the de novo pathway of purine nucleotide biosynthesis (581 aa)
     
 
  0.909
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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