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STRINGSTRING
AS1 protein (Solanum lycopersicum) - STRING interaction network
"AS1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS1Uncharacterized protein; Asparagine synthetase (590 aa)    
Predicted Functional Partners:
ASS
Arginosuccinate synthase family (494 aa)
   
  0.995
101258399
annotation not available (565 aa)
   
 
  0.987
101261642
Aspartate aminotransferase 5 (462 aa)
     
 
  0.985
LOC544088
Uncharacterized protein; Aspartate carbamoyltransferase ; Belongs to the ATCase/OTCase family (377 aa)
   
 
  0.954
101260072
annotation not available (452 aa)
     
 
  0.947
101244094
Aspartate aminotransferase 1 (425 aa)
     
 
  0.947
101258802
Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP (507 aa)
   
 
  0.922
BAC19.7
Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP (581 aa)
   
 
  0.922
Solyc12g014530.1.1
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate (605 aa)
     
 
  0.901
Solyc01g056580.2.1
annotation not available (386 aa)
     
 
  0.901
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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