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STRINGSTRING
101267411 protein (Solanum lycopersicum) - STRING interaction network
"101267411" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101267411annotation not available (390 aa)    
Predicted Functional Partners:
101262055
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes (229 aa)
   
 
  0.993
101257709
Ribosomal protein S8e family protein (260 aa)
     
 
  0.993
101249690
Ribosomal protein L24e family protein (166 aa)
     
 
  0.993
101253571
annotation not available (812 aa)
     
 
  0.992
Solyc10g083600.1.1
Ribosomal RNA processing Brix domain protein (337 aa)
     
 
  0.991
Solyc03g112530.2.1
WD-40 repeat family protein / notchless protein, putative (481 aa)
     
 
  0.990
101257580
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (603 aa)
     
 
  0.990
Solyc11g066630.1.1
annotation not available (145 aa)
     
 
  0.988
Solyc06g074720.2.1
annotation not available (219 aa)
     
 
  0.988
101261781
annotation not available (589 aa)
     
 
  0.988
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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