STRINGSTRING
Solyc06g007700.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g007700.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g007700.2.1Uncharacterized protein (296 aa)    
Predicted Functional Partners:
Solyc06g071470.2.1
Uncharacterized protein (527 aa)
         
  0.902
Solyc03g114330.2.1
Uncharacterized protein (399 aa)
         
  0.885
LOC543864
Peroxisomal targeting signal type 2 receptor (316 aa)
       
 
  0.620
Solyc12g017470.1.1
Uncharacterized protein (358 aa)
       
 
  0.540
Solyc07g017290.2.1
Uncharacterized protein (351 aa)
       
 
  0.540
Solyc10g005650.2.1
Uncharacterized protein (744 aa)
     
   
  0.527
Solyc05g054950.2.1
Peroxin-12 ; Required for peroxisome biogenesis and for PTS1- and PTS2-dependent protein import into peroxisomes (393 aa)
           
  0.516
Solyc06g008730.2.1
Uncharacterized protein (929 aa)
           
  0.489
Solyc12g005760.1.1
Uncharacterized protein (266 aa)
           
  0.489
Solyc07g052600.2.1
Uncharacterized protein (269 aa)
           
  0.489
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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