STRINGSTRING
Solyc06g007710.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g007710.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g007710.2.1Uncharacterized protein (314 aa)    
Predicted Functional Partners:
Solyc06g008120.1.1
Uncharacterized protein (107 aa)
     
  0.910
Solyc03g005700.1.1
Uncharacterized protein (100 aa)
     
  0.910
Solyc10g006020.2.1
Uncharacterized protein (359 aa)
     
  0.883
Solyc07g065400.2.1
Uncharacterized protein (201 aa)
     
  0.883
Solyc04g079270.2.1
Uncharacterized protein (524 aa)
     
  0.822
Solyc12g049220.1.1
Uncharacterized protein (185 aa)
     
  0.770
Solyc10g024350.1.1
Uncharacterized protein (151 aa)
     
  0.770
Solyc03g121860.1.1
Uncharacterized protein (190 aa)
     
  0.770
Solyc07g008350.2.1
Uncharacterized protein (276 aa)
     
  0.756
Solyc03g113210.2.1
Uncharacterized protein (236 aa)
     
  0.756
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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