STRINGSTRING
Solyc06g007760.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g007760.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g007760.2.1Uncharacterized protein (220 aa)    
Predicted Functional Partners:
Solyc01g098990.2.1
Uncharacterized protein (308 aa)
   
        0.582
Solyc02g021000.2.1
Uncharacterized protein (183 aa)
   
        0.551
Solyc06g082760.2.1
Uncharacterized protein (203 aa)
     
        0.538
Solyc06g082750.2.1
Uncharacterized protein (203 aa)
     
        0.538
Solyc04g009370.2.1
Uncharacterized protein (243 aa)
   
          0.526
Solyc11g006060.1.1
Uncharacterized protein (451 aa)
   
        0.501
Solyc12g014390.1.1
Uncharacterized protein (229 aa)
     
        0.499
Solyc07g062190.2.1
Uncharacterized protein (233 aa)
     
        0.499
PETE
Plastocyanin, chloroplastic ; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I (170 aa)
   
        0.479
Solyc10g045310.1.1
Uncharacterized protein (229 aa)
   
        0.474
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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