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STRINGSTRING
101262421 protein (Solanum lycopersicum) - STRING interaction network
"101262421" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101262421annotation not available (353 aa)    
Predicted Functional Partners:
Solyc02g050280.2.1
annotation not available (959 aa)
     
 
  0.686
101245154
annotation not available (457 aa)
           
  0.675
101264569
SNF2 domain-containing protein / helicase domain-containing protein (738 aa)
     
 
  0.620
Solyc02g089970.2.1
Uncharacterized protein; Nucleic acid binding;sequence-specific DNA binding transcription factors;zinc ion binding (1509 aa)
       
 
  0.617
Solyc10g024470.1.1
annotation not available (490 aa)
     
 
  0.596
LHP1
Chromo domain protein LHP1; Structural component of heterochromatin involved in gene repression. Recognizes and binds histone H3 tails methylated at ’Lys-9’, leading to epigenetic repression (399 aa)
     
 
  0.596
FIE
Fertilization-independent endosperm protein (372 aa)
       
 
  0.584
101256627
Long-chain-alcohol oxidase; Long-chain fatty alcohol oxidase involved in the omega- oxidation pathway of lipid degradation (741 aa)
           
  0.577
101251417
Long-chain-alcohol oxidase; Long-chain fatty alcohol oxidase involved in the omega- oxidation pathway of lipid degradation (731 aa)
           
  0.577
101264796
ARM repeat superfamily protein (1222 aa)
     
        0.558
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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