STRINGSTRING
Solyc06g008200.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g008200.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g008200.2.1Uncharacterized protein (476 aa)    
Predicted Functional Partners:
Solyc11g069160.1.1
Uncharacterized protein (877 aa)
     
 
  0.689
Solyc01g091870.2.1
Uncharacterized protein (698 aa)
       
 
  0.566
Solyc02g078210.2.1
Uncharacterized protein (925 aa)
           
  0.491
Solyc12g056440.1.1
Uncharacterized protein (697 aa)
       
 
  0.457
Solyc08g080200.2.1
Uncharacterized protein (672 aa)
       
 
  0.457
Solyc08g007800.2.1
Uncharacterized protein (669 aa)
       
 
  0.457
ail
IDS4-like protein (266 aa)
       
 
  0.438
Solyc02g088210.2.1
Uncharacterized protein (296 aa)
       
 
  0.438
Solyc02g067160.2.1
Uncharacterized protein (307 aa)
       
 
  0.438
Solyc01g090890.2.1
Uncharacterized protein (262 aa)
       
 
  0.438
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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