STRINGSTRING
Solyc06g008280.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g008280.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g008280.2.1Uncharacterized protein (99 aa)    
Predicted Functional Partners:
Solyc11g070120.1.1
Uncharacterized protein (218 aa)
     
  0.977
Solyc08g065900.2.1
Uncharacterized protein (252 aa)
     
  0.977
Solyc05g026050.2.1
Uncharacterized protein (218 aa)
     
  0.977
Solyc11g067240.1.1
Uncharacterized protein (432 aa)
     
  0.976
Solyc11g067230.1.1
Uncharacterized protein (432 aa)
     
  0.976
Solyc11g007170.1.1
Uncharacterized protein (404 aa)
     
  0.976
Solyc06g074840.2.1
Uncharacterized protein (222 aa)
     
0.955
Solyc11g066260.1.1
Uncharacterized protein (220 aa)
     
0.955
Solyc11g006500.1.1
Uncharacterized protein (232 aa)
     
  0.954
Solyc05g055170.2.1
Uncharacterized protein (234 aa)
     
  0.954
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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