STRINGSTRING
Solyc06g009280.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g009280.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g009280.1.1Uncharacterized protein (1289 aa)    
Predicted Functional Partners:
Solyc08g083120.2.1
Ubiquitin (128 aa)
       
  0.783
Solyc01g096290.2.1
Ubiquitin (128 aa)
       
  0.783
Solyc03g098140.2.1
Uncharacterized protein (343 aa)
   
 
  0.733
Solyc12g006050.1.1
Uncharacterized protein (592 aa)
           
  0.692
Solyc11g065190.1.1
Uncharacterized protein (181 aa)
       
 
  0.690
Solyc12g098800.1.1
Uncharacterized protein (55 aa)
           
  0.690
Solyc10g047430.1.1
Uncharacterized protein (73 aa)
           
  0.690
Solyc08g077910.2.1
Uncharacterized protein (251 aa)
           
  0.690
Solyc07g055690.1.1
Uncharacterized protein (448 aa)
           
  0.690
Solyc06g009940.1.1
Uncharacterized protein (72 aa)
           
  0.690
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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