STRINGSTRING
Solyc06g009680.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g009680.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g009680.2.1Uncharacterized protein (1237 aa)    
Predicted Functional Partners:
Solyc01g111870.1.1
Uncharacterized protein (2728 aa)
     
  0.976
Solyc02g083600.2.1
Uncharacterized protein (599 aa)
     
  0.973
Solyc09g059440.1.1
Uncharacterized protein (595 aa)
     
 
  0.954
Solyc05g054430.2.1
DNA replication complex GINS protein PSF2 (210 aa)
     
 
  0.945
Solyc10g044780.1.1
Uncharacterized protein (440 aa)
     
  0.901
Solyc01g111550.2.1
Uncharacterized protein (415 aa)
     
 
  0.890
Solyc06g071490.1.1
Uncharacterized protein (1135 aa)
     
  0.888
Solyc03g112950.2.1
Uncharacterized protein (1501 aa)
     
  0.888
Solyc03g112940.2.1
Uncharacterized protein (1490 aa)
     
  0.888
Solyc11g068480.1.1
Uncharacterized protein (175 aa)
       
 
  0.854
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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