STRINGSTRING
Solyc06g009780.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g009780.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g009780.2.1Uncharacterized protein (1005 aa)    
Predicted Functional Partners:
Solyc03g111380.2.1
Tubulin gamma chain ; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome (474 aa)
     
  0.949
Solyc12g095870.1.1
Uncharacterized protein (295 aa)
     
  0.823
Solyc08g066050.2.1
Uncharacterized protein (303 aa)
     
  0.823
Solyc04g009330.2.1
Uncharacterized protein (287 aa)
     
  0.823
Solyc02g080460.1.1
Uncharacterized protein (84 aa)
     
  0.811
Solyc04g081540.2.1
Uncharacterized protein (298 aa)
     
  0.796
Solyc03g053100.2.1
Uncharacterized protein (605 aa)
     
  0.796
Solyc07g053820.2.1
Uncharacterized protein (529 aa)
     
  0.775
Solyc06g051040.2.1
Uncharacterized protein (588 aa)
     
  0.775
Solyc05g014370.2.1
Uncharacterized protein (208 aa)
     
  0.772
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (18%) [HD]