STRINGSTRING
Solyc06g009860.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g009860.1.1" - Uncharacterized protein in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
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Experiments
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[Homology]
Score
Solyc06g009860.1.1Uncharacterized protein (77 aa)    
Predicted Functional Partners:
Solyc05g007880.2.1
Uncharacterized protein (441 aa)
       
 
  0.806
CNX5
Molybdenum cofactor synthesis protein 3 ; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl-adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thiocarboxylation (-COSH) of their C-terminus. The reaction probably involves hydrogen sulfide that is [...] (460 aa)
     
  0.702
Solyc01g107510.2.1
DNA repair protein REV1 ; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3’-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents (1045 aa)
       
      0.624
Solyc12g005860.1.1
Aconitate hydratase ; Catalyzes the isomerization of citrate to isocitrate via cis-aconitate (981 aa)
     
 
  0.597
Solyc07g052350.2.1
Aconitate hydratase ; Catalyzes the isomerization of citrate to isocitrate via cis-aconitate (995 aa)
     
 
  0.597
Solyc05g054640.2.1
Uncharacterized protein (954 aa)
       
      0.576
Solyc04g011350.2.1
Uncharacterized protein (1020 aa)
       
      0.576
Solyc11g005860.1.1
Uncharacterized protein (654 aa)
     
  0.546
Solyc10g012370.2.1
Cysteine synthase (351 aa)
   
   
  0.518
Solyc09g082060.2.1
Cysteine synthase (325 aa)
   
   
  0.518
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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