STRINGSTRING
Solyc06g009950.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g009950.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
Solyc06g009950.1.1Uncharacterized protein (56 aa)    
Predicted Functional Partners:
Solyc12g062610.1.1
Uncharacterized protein (139 aa)
   
          0.526
Solyc09g015320.1.1
Uncharacterized protein (230 aa)
   
          0.520
Solyc09g018800.1.1
Uncharacterized protein (95 aa)
   
          0.519
Solyc09g015340.1.1
Uncharacterized protein (206 aa)
   
          0.517
Solyc09g015300.1.1
Uncharacterized protein (118 aa)
   
          0.515
Solyc12g035580.1.1
Uncharacterized protein (52 aa)
   
          0.514
Solyc09g015280.1.1
Uncharacterized protein (149 aa)
   
          0.514
Solyc02g036320.1.1
Uncharacterized protein (63 aa)
   
          0.514
Solyc02g020960.1.1
Uncharacterized protein (283 aa)
   
          0.514
psaA
Photosystem I P700 apoprotein A1; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin (135 aa)
   
          0.513
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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