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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc06g009960.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g009960.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g009960.1.1annotation not available (410 aa)    
Predicted Functional Partners:
101249702
annotation not available (414 aa)
     
 
  0.994
101248107
annotation not available (413 aa)
     
 
  0.994
101245737
annotation not available (329 aa)
     
 
  0.983
ArcA1
LeArcA1 protein (326 aa)
     
 
  0.983
ArcA2
LeArcA2 protein (326 aa)
     
 
  0.983
101252719
annotation not available (260 aa)
     
 
  0.982
101268112
annotation not available (261 aa)
     
 
  0.982
101260518
annotation not available (261 aa)
     
 
  0.982
101268580
annotation not available (148 aa)
     
 
  0.977
101265118
annotation not available (148 aa)
     
 
  0.977
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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