• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc06g011330.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g011330.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g011330.1.1annotation not available (298 aa)    
Predicted Functional Partners:
NR
Nitrate reductase [NADH]; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
           
  0.673
101255422
Reticulon family protein (209 aa)
       
      0.605
Solyc05g007200.2.1
Uncharacterized protein; RNA-binding (RRM/RBD/RNP motifs) family protein (305 aa)
       
      0.605
PRO2
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the C-terminal section; belongs to the gamma- glutamyl phosphate reductase family (720 aa)
   
   
  0.563
101244293
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family (717 aa)
   
   
  0.563
101260712
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome (474 aa)
       
 
  0.535
NAGPR
Oxidoreductases, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;copper ion binding (403 aa)
   
   
  0.534
101267455
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (527 aa)
           
  0.514
ASS
Arginosuccinate synthase family (494 aa)
     
   
  0.502
AS
L-Aspartase-like family protein (525 aa)
   
   
  0.467
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (23%) [HD]