STRINGSTRING
Solyc06g019170.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g019170.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g019170.2.1Uncharacterized protein (717 aa)    
Predicted Functional Partners:
OAT
Ornithine aminotransferase (425 aa)
   
  0.986
PRO2
Delta-1-pyrroline-5-carboxylate synthase Glutamate 5-kinase Gamma-glutamyl phosphate reductase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants (720 aa)
 
 
0.985
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
   
 
  0.978
gdh1
Glutamate dehydrogenase (411 aa)
         
  0.945
Solyc06g033860.1.1
Glutamate dehydrogenase (411 aa)
         
  0.945
Solyc03g094010.2.1
Glutamate dehydrogenase (411 aa)
         
  0.945
Solyc01g068210.2.1
Uncharacterized protein (634 aa)
         
  0.945
Solyc08g083380.2.1
Uncharacterized protein (88 aa)
       
      0.943
Solyc06g071000.2.1
Uncharacterized protein (554 aa)
         
  0.942
Solyc12g094600.1.1
Uncharacterized protein (425 aa)
       
      0.901
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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