STRINGSTRING
Solyc06g030570.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g030570.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g030570.2.1Uncharacterized protein (258 aa)    
Predicted Functional Partners:
Solyc06g030580.2.1
Uncharacterized protein (181 aa)
 
          0.697
Solyc07g018360.2.1
Elongation factor Ts ; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (1048 aa)
   
        0.632
Solyc09g065270.2.1
Uncharacterized protein (267 aa)
   
   
  0.548
Solyc06g019200.2.1
Uncharacterized protein (468 aa)
   
        0.524
Solyc08g081150.2.1
Uncharacterized protein (536 aa)
   
   
  0.520
Solyc03g111360.2.1
Uncharacterized protein (471 aa)
 
   
  0.490
Solyc01g091800.2.1
rRNA adenine N(6)-methyltransferase (365 aa)
   
   
  0.483
Solyc02g084730.2.1
rRNA adenine N(6)-methyltransferase (386 aa)
   
   
  0.479
Solyc01g100430.2.1
rRNA adenine N(6)-methyltransferase (354 aa)
   
   
  0.479
Solyc00g050030.1.1
Annotation not available (702 aa)
     
 
  0.478
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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