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STRINGSTRING
Solyc06g030610.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g030610.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g030610.1.1annotation not available (274 aa)    
Predicted Functional Partners:
101265336
annotation not available (356 aa)
     
 
  0.631
101248921
annotation not available (361 aa)
     
 
  0.610
101265334
Protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases (1080 aa)
     
      0.593
543506
Uncharacterized protein; 1-aminocyclopropane-1-carboxylate oxidase ; Belongs to the iron/ascorbate-dependent oxidoreductase family (320 aa)
           
  0.583
101250434
annotation not available (387 aa)
           
  0.581
ERF-1
Ethylene-responsive transcription factor 1; Involved in the regulation of gene expression during fruit ripening, by stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Probably acts as a transcriptional activator and may be involved in disease resistance pathways (By similarity) (242 aa)
           
  0.581
ACC4
1-aminocyclopropane-1-carboxylate synthase 4; Catalyzes the formation of 1-aminocyclopropane-1- carboxylate, a direct precursor of ethylene in higher plants; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family (476 aa)
           
  0.451
ACS2
1-aminocyclopropane-1-carboxylate synthase 2; 1-aminocyclopropane-1-carboxylate synthase (ACS) enzymes catalyze the conversion of S-adenosyl-L-methionine (SAM) into 1- aminocyclopropane-1-carboxylate (ACC), a direct precursor of ethylene (485 aa)
           
  0.451
101265943
annotation not available (452 aa)
           
  0.429
101250433
annotation not available (339 aa)
     
 
  0.416
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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