STRINGSTRING
Solyc06g033900.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g033900.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g033900.1.1Uncharacterized protein (123 aa)    
Predicted Functional Partners:
Solyc12g035870.1.1
Uncharacterized protein (398 aa)
     
  0.986
Solyc09g010500.2.1
Uncharacterized protein (144 aa)
     
  0.978
Solyc03g031690.2.1
Uncharacterized protein (109 aa)
     
  0.977
Solyc01g081150.2.1
Uncharacterized protein (144 aa)
     
  0.977
Solyc11g069910.1.1
Uncharacterized protein (116 aa)
     
  0.976
Solyc05g010300.2.1
Uncharacterized protein (319 aa)
     
  0.976
Solyc06g083360.2.1
Uncharacterized protein (71 aa)
     
  0.975
Solyc10g007650.2.1
Uncharacterized protein (52 aa)
     
  0.975
Solyc05g053430.2.1
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (114 aa)
     
  0.975
Solyc06g073870.2.1
Uncharacterized protein (138 aa)
     
  0.974
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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