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Solyc06g034150.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g034150.2.1" - Uncharacterized protein in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g034150.2.1Uncharacterized protein (468 aa)    
Predicted Functional Partners:
Solyc07g006810.2.1
Uncharacterized protein (853 aa)
   
 
  0.977
GABA-TP2
Gamma aminobutyrate transaminase 2 ; Transaminase that degrades gamma-amino butyric acid (GABA) and uses pyruvate or glyoxylate as amino-group acceptor. Cannot use beta-alanine, ornithine, acetylornithine, serine, glycine, asparagine, glutamine, glutamate, valine, leucine, isoleucine, methionine, phenylalanine, histidine, lysine, arginine, aspartate, threonine, tyrosine, tryptophan, proline, or cysteine as amino donors. May be responsible for establishing the GABA gradient in the carpel (458 aa)
   
 
  0.700
GABA-TP3
Gamma aminobutyrate transaminase 3, chloroplastic ; Transaminase that degrades gamma-amino butyric acid (GABA) and uses pyruvate or glyoxylate as amino-group acceptor. Cannot use beta-alanine, ornithine, acetylornithine, serine, glycine, asparagine, glutamine, glutamate, valine, leucine, isoleucine, methionine, phenylalanine, histidine, lysine, arginine, aspartate, threonine, tyrosine, tryptophan, proline, or cysteine as amino donors (516 aa)
   
 
  0.700
Solyc08g014610.2.1
Uncharacterized protein (458 aa)
   
 
  0.700
GABA-TP1
Gamma aminobutyrate transaminase 1, mitochondrial ; Transaminase that degrades gamma-amino butyric acid (GABA) and uses pyruvate or glyoxylate as amino-group acceptor. Cannot use beta-alanine, ornithine, acetylornithine, serine, glycine, asparagine, glutamine, glutamate, valine, leucine, isoleucine, methionine, phenylalanine, histidine, lysine, arginine, aspartate, threonine, tyrosine, tryptophan, proline, or cysteine as amino donors. Acts predominantly in vegetative tissues (515 aa)
   
 
  0.700
Solyc06g073470.2.1
Uncharacterized protein (376 aa)
   
   
  0.678
Solyc10g083270.1.1
Uncharacterized protein (331 aa)
   
  0.568
Solyc06g064640.2.1
Uncharacterized protein (378 aa)
   
  0.568
Solyc09g075300.2.1
Uncharacterized protein (318 aa)
   
  0.566
Solyc06g009170.2.1
Uncharacterized protein (318 aa)
   
  0.566
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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