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101249827 protein (Solanum lycopersicum) - STRING interaction network
"101249827" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101249827Uncharacterized protein; Biotin F (468 aa)    
Predicted Functional Partners:
101244782
Uncharacterized protein; Adenosylmethionine-8-amino-7-oxononanoate transaminases (853 aa)
   
 
  0.996
101247927
Radical SAM superfamily protein (376 aa)
   
   
  0.949
101258825
annotation not available (722 aa)
           
  0.815
Solyc07g055120.2.1
annotation not available (676 aa)
           
  0.815
101252547
annotation not available (374 aa)
   
   
  0.806
GCP2
Probable tRNA N6-adenosine threonylcarbamoyltransferase; Component of the EKC/KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity (346 aa)
     
   
  0.767
101253202
annotation not available (313 aa)
   
   
  0.706
Trax
Uncharacterized protein; Translin-associated factor X (196 aa)
           
  0.695
101245573
Uncharacterized protein; HOPW1-1-interacting 1; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (460 aa)
         
  0.693
LOC543967
Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic ; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily (482 aa)
         
  0.693
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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