STRINGSTRING
Solyc06g034290.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g034290.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g034290.2.1Uncharacterized protein (510 aa)    
Predicted Functional Partners:
Solyc01g081520.2.1
Mitochondrial small ribosomal subunit protein (607 aa)
     
 
  0.625
Solyc11g011960.1.1
Uncharacterized protein (477 aa)
     
 
  0.624
Solyc05g054060.2.1
Uncharacterized protein (477 aa)
     
 
  0.624
Solyc04g058070.2.1
Uncharacterized protein (617 aa)
       
      0.617
Solyc02g068530.2.1
Uncharacterized protein (485 aa)
       
      0.617
Solyc12g014570.1.1
Uncharacterized protein (751 aa)
   
   
  0.444
Solyc11g045050.1.1
Uncharacterized protein (175 aa)
   
   
  0.444
Solyc11g045040.1.1
Uncharacterized protein (84 aa)
   
   
  0.444
Solyc07g065120.2.1
Uncharacterized protein (753 aa)
   
   
  0.444
Solyc06g069470.2.1
Uncharacterized protein (391 aa)
   
   
  0.444
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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