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Solyc06g034330.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g034330.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g034330.2.1annotation not available (582 aa)    
Predicted Functional Partners:
101256100
Uncharacterized protein; INVOLVED IN- biological_process unknown; LOCATED IN- endomembrane system; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Mannose-6-phosphate receptor, binding (InterPro-IPR009011), Glucosidase II b /.../bunit-like (InterPro-IPR012913); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (316 aa)
     
 
  0.901
101256736
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (245 aa)
     
 
  0.896
Solyc09g064420.2.1
annotation not available (775 aa)
           
  0.764
101268209
annotation not available (465 aa)
     
 
  0.744
101244402
annotation not available (599 aa)
     
 
  0.744
101263734
annotation not available (460 aa)
     
 
  0.744
101258642
annotation not available (428 aa)
     
 
  0.744
101262172
Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Domain of unknown function KxDL (InterPro-IPR019371); Has 135 Blast hits to 135 proteins in 54 species- Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 3 (source- NCBI BLink) (123 aa)
       
      0.744
101267848
annotation not available (969 aa)
           
  0.740
101266615
UBC32; Ubiquitin-conjugating enzyme 32; Belongs to the ubiquitin-conjugating enzyme family (301 aa)
     
 
  0.730
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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