STRINGSTRING
Solyc06g036200.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g036200.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g036200.1.1Uncharacterized protein (129 aa)    
Predicted Functional Partners:
Solyc12g096470.1.1
Uncharacterized protein (138 aa)
     
  0.987
Solyc04g078050.2.1
Uncharacterized protein (934 aa)
       
  0.986
Solyc05g018120.1.1
Uncharacterized protein (210 aa)
     
  0.981
Solyc05g010570.2.1
Uncharacterized protein (170 aa)
     
  0.981
Solyc04g010090.2.1
Uncharacterized protein (161 aa)
     
  0.980
Solyc10g006100.2.1
Uncharacterized protein (547 aa)
       
  0.979
Solyc07g065040.2.1
Uncharacterized protein (560 aa)
       
  0.979
Solyc02g069170.1.1
Uncharacterized protein (280 aa)
       
  0.974
Solyc06g065700.2.1
Uncharacterized protein (685 aa)
       
  0.974
Solyc01g028930.2.1
Uncharacterized protein (203 aa)
       
  0.973
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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