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STRINGSTRING
Solyc06g036700.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g036700.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g036700.1.1annotation not available (203 aa)    
Predicted Functional Partners:
101248232
Protein serine/threonine kinases;ATP binding;catalytics (457 aa)
     
        0.843
101264002
Ankyrin repeat family protein (327 aa)
     
   
  0.703
101244931
Uncharacterized protein; S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (315 aa)
         
  0.685
101268875
annotation not available (105 aa)
       
 
  0.576
Solyc03g123940.1.1
annotation not available (91 aa)
       
 
  0.576
101253271
annotation not available (105 aa)
       
 
  0.576
101255013
Protein arginine N-methyltransferase; SHK1 binding protein 1; Belongs to the class I-like SAM-binding methyltransferase superfamily (655 aa)
           
  0.560
101265731
annotation not available (260 aa)
           
  0.522
Solyc09g060000.1.1
annotation not available (263 aa)
     
   
  0.494
Solyc07g008580.1.1
annotation not available (278 aa)
     
   
  0.494
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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