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STRINGSTRING
ccs52B protein (Solanum lycopersicum) - STRING interaction network
"ccs52B" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccs52BUncharacterized protein; FIZZY-related 3 (499 aa)    
Predicted Functional Partners:
101257469
DNA-binding HORMA family protein (208 aa)
     
 
  0.989
101260121
Uncharacterized protein; Anaphase-promoting complex subunit 8 (576 aa)
     
 
  0.987
101261990
Uncharacterized protein; Anaphase promoting complex 6 (551 aa)
     
 
  0.987
101267195
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle (191 aa)
     
 
  0.983
101266186
annotation not available (181 aa)
     
 
  0.983
Solyc11g013240.1.1
Putative protein kinase 1 (741 aa)
     
 
  0.967
101258564
annotation not available (532 aa)
     
 
  0.962
101265455
ATP binding;protein kinases;protein serine/threonine kinases (529 aa)
     
 
  0.945
Solyc06g051040.2.1
Uncharacterized protein; Mad3/BUB1 homology region 1 (588 aa)
     
 
  0.945
101246051
Uncharacterized protein; BUB1-related (BUB1- budding uninhibited by benzymidazol 1) (389 aa)
     
 
  0.945
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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