STRINGSTRING
Solyc06g048430.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g048430.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g048430.2.1Uncharacterized protein (145 aa)    
Predicted Functional Partners:
Solyc00g042140.1.1
Annotation not available (399 aa)
   
  0.999
Solyc00g042130.1.1
Annotation not available (704 aa)
   
  0.999
Solyc12g005060.1.1
Uncharacterized protein (349 aa)
   
  0.998
Solyc03g115110.2.1
Uncharacterized protein (324 aa)
   
  0.998
Solyc02g080540.1.1
Uncharacterized protein (377 aa)
   
  0.998
Solyc12g056830.1.1
Uncharacterized protein (250 aa)
   
  0.998
Solyc05g050500.1.1
Uncharacterized protein (241 aa)
   
  0.998
Solyc01g087120.2.1
Uncharacterized protein (239 aa)
   
  0.998
Solyc12g062530.1.1
Uncharacterized protein (99 aa)
   
  0.998
Solyc12g042230.1.1
Uncharacterized protein (93 aa)
   
  0.998
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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