• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc06g048710.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g048710.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g048710.1.1annotation not available (562 aa)    
Predicted Functional Partners:
101251434
Ribosomal protein S5 family protein; Belongs to the universal ribosomal protein uS5 family (502 aa)
     
        0.854
101248424
Transmembrane protein-related (825 aa)
     
        0.842
COP1
Uncharacterized protein; COP1 homolog (677 aa)
       
 
  0.806
101249698
annotation not available (672 aa)
       
 
  0.806
Coi1
Coronatine-insensitive 1 (603 aa)
           
  0.763
101253700
FH interacting protein 1 (262 aa)
       
      0.746
aos
Allene oxide synthase 1, chloroplastic; Cytochrome P450 of the CYP74A subfamily involved in the biosynthesis of jasmonic acid from lipoxygenase-derived hydroperoxides of free fatty acids. Catalyzes the synthesis of unstable allene oxide, which is further converted spontaneously by hydrolysis or cyclization. Can use 13S-hydroperoxy- 9(Z),11(E),15(Z)-octadecatrienoic acid (13-HPOT) and 13S- hydroperoxy-9(Z),11(E)-octadecadienoic acid (13-HPOD) as substrates (534 aa)
     
   
  0.689
opr3
12-oxophytodienoate reductase 3; Specifically cleaves olefinic bonds in cyclic enones. Involved in the biosynthesis of jasmonic acid (JA) and perhaps in biosynthesis or metabolism of other oxylipin signaling moleclules. It is required for the spatial and temporal regulation of JA levels during dehiscence of anthers, promoting the stomium degeneration program (By similarity). In vitro, reduces 9S,13S-12- oxophytodienoic acid (9S,13S-OPDA) and 9R,13R-OPDA to 9S,13S-OPC- 8-0 and 9R,13R-OPC-8-0, respectively; Belongs to the NADH-flavin oxidoreductase/NADH oxidase family (396 aa)
     
   
  0.680
LOC778225
Isochorismate synthase (580 aa)
           
  0.594
EIN2
Ethylene signaling protein (1316 aa)
           
  0.567
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (11%) [HD]