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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc06g050180.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g050180.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g050180.1.1annotation not available (245 aa)    
Predicted Functional Partners:
101264867
DNA helicase; Minichromosome maintenance (MCM2/3/5) family protein; Belongs to the MCM family (831 aa)
     
 
  0.997
101256302
DNA helicase; Minichromosome maintenance (MCM2/3/5) family protein; Belongs to the MCM family (737 aa)
     
 
  0.997
101243636
DNA helicase; Minichromosome maintenance (MCM2/3/5) family protein; Belongs to the MCM family (718 aa)
     
 
  0.997
Solyc11g040120.1.1
DNA helicase; Minichromosome maintenance (MCM2/3/5) family protein; Belongs to the MCM family (860 aa)
     
 
  0.996
101268250
DNA helicase; Minichromosome maintenance (MCM2/3/5) family protein; Belongs to the MCM family (787 aa)
     
 
  0.995
Solyc01g105530.2.1
annotation not available (75 aa)
     
 
  0.989
Solyc01g105520.2.1
Uncharacterized protein; Minichromosome maintenance 9; Belongs to the MCM family (600 aa)
     
 
  0.989
101244828
DNA helicase; Minichromosome maintenance (MCM2/3/5) family protein; Belongs to the MCM family (834 aa)
     
 
  0.980
Solyc01g020120.1.1
annotation not available (149 aa)
     
 
  0.980
Solyc09g007330.2.1
Uncharacterized protein; Minichromosome maintenance 8; Belongs to the MCM family (795 aa)
     
 
  0.980
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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