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STRINGSTRING
101262122 protein (Solanum lycopersicum) - STRING interaction network
"101262122" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101262122annotation not available (1287 aa)    
Predicted Functional Partners:
101250389
RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) (1119 aa)
     
 
  0.897
101256958
BEST Arabidopsis thaliana protein match is- sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR-AT3G18380.1); Has 89 Blast hits to 86 proteins in 16 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plant /.../; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (304 aa)
       
 
  0.862
Solyc11g008150.1.1
Uncharacterized protein; Kow domain-containing transcription factor 1 (1509 aa)
     
 
  0.759
RPE1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1678 aa)
     
 
  0.715
RPD1
Uncharacterized protein; DNA-directed RNA polymerase (1206 aa)
     
 
  0.692
DCL3
Uncharacterized protein; Dicer-like 3 (1430 aa)
       
 
  0.688
Solyc08g067200.1.1
annotation not available (291 aa)
       
 
  0.688
AGO6
AGO6; Argonaute family protein; Belongs to the argonaute family (903 aa)
     
   
  0.687
101247931
Uncharacterized protein; RNA-directed DNA methylation 4 (359 aa)
           
  0.626
Solyc10g045190.1.1
annotation not available (119 aa)
       
 
  0.623
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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