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101263325 protein (Solanum lycopersicum) - STRING interaction network
"101263325" - PRA1 family protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101263325PRA1 family protein; May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments (218 aa)    
Predicted Functional Partners:
Rab1B
Small GTP-binding protein (202 aa)
       
 
  0.709
101250798
Uncharacterized protein; Pleckstrin homology (PH) domain-containing protein (439 aa)
       
      0.625
Solyc03g115730.2.1
annotation not available (242 aa)
       
      0.625
101251955
PRA1 family protein; May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments (251 aa)
           
  0.586
Solyc12g006290.1.1
annotation not available (233 aa)
       
 
  0.578
Solyc07g044880.2.1
annotation not available (142 aa)
       
 
  0.578
Solyc02g069590.2.1
Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (281 aa)
     
        0.575
101245110
Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (291 aa)
     
        0.575
101260768
annotation not available (167 aa)
           
  0.556
101266993
Uncharacterized protein; Nuclear transport factor 2 (NTF2) family protein (227 aa)
       
      0.549
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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