STRINGSTRING
Endo-LE protein (Solanum lycopersicum) - STRING interaction network
"Endo-LE" - endo-beta-N-acetylglucosaminidase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Endo-LEendo-beta-N-acetylglucosaminidase (EC-3.2.1.96) (726 aa)    
Predicted Functional Partners:
Solyc08g082480.2.1
Uncharacterized protein (583 aa)
         
    0.507
Solyc05g050590.2.1
Uncharacterized protein (568 aa)
         
    0.507
Solyc03g083350.2.1
Uncharacterized protein (580 aa)
         
    0.507
Solyc01g095990.2.1
Uncharacterized protein (571 aa)
         
    0.507
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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