STRINGSTRING
Solyc06g051270.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g051270.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g051270.2.1Uncharacterized protein (361 aa)    
Predicted Functional Partners:
Solyc03g113790.2.1
Uncharacterized protein (415 aa)
   
0.988
GME2
GDP-mannose 3’,5’-epimerase (376 aa)
   
 
  0.971
GME1
GDP-mannose 3’,5’-epimerase (376 aa)
   
 
  0.971
LOC778245
Phosphomannomutase ; Involved in ascorbic acid biosynthesis and in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions (252 aa)
     
 
  0.959
LePMM
Phosphomannomutase (EC-5.4.2.8); Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions (252 aa)
     
 
  0.959
Solyc05g046340.1.1
Phosphomannomutase ; Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions (252 aa)
     
 
  0.959
Solyc03g118270.1.1
Uncharacterized protein (363 aa)
   
 
  0.951
Solyc02g084210.1.1
Uncharacterized protein (361 aa)
   
 
  0.951
Solyc04g082390.2.1
Uncharacterized protein (238 aa)
   
  0.935
Solyc10g078480.1.1
Uncharacterized protein (482 aa)
   
  0.931
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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