STRINGSTRING
Solyc06g051680.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g051680.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g051680.1.1Uncharacterized protein (123 aa)    
Predicted Functional Partners:
Solyc12g095900.1.1
Uncharacterized protein (722 aa)
     
 
  0.769
Solyc11g070100.1.1
Uncharacterized protein (603 aa)
     
 
  0.769
Solyc08g065870.2.1
Uncharacterized protein (644 aa)
     
 
  0.769
Solyc06g062480.2.1
Uncharacterized protein (602 aa)
     
 
  0.769
Solyc06g069690.2.1
Uncharacterized protein (502 aa)
     
 
  0.676
Solyc03g115770.2.1
Uncharacterized protein (552 aa)
     
 
  0.676
Solyc06g005680.2.1
Uncharacterized protein (266 aa)
     
 
  0.599
Solyc10g005030.2.1
Uncharacterized protein (645 aa)
     
 
  0.558
Solyc03g081240.2.1
Uncharacterized protein (680 aa)
     
 
  0.558
phyA
Phytochrome ; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1123 aa)
       
 
  0.557
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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