STRINGSTRING
Solyc06g051780.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g051780.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g051780.2.1Uncharacterized protein (240 aa)    
Predicted Functional Partners:
Solyc12g017860.1.1
Uncharacterized protein (940 aa)
     
 
  0.709
Solyc05g047520.2.1
Uncharacterized protein (936 aa)
     
 
  0.709
Solyc01g103080.2.1
Uncharacterized protein (991 aa)
     
 
  0.709
Solyc06g005990.2.1
Uncharacterized protein (1361 aa)
     
 
  0.545
Solyc05g006530.2.1
Uncharacterized protein (1154 aa)
     
 
  0.545
Solyc12g099180.1.1
Uncharacterized protein (435 aa)
     
 
  0.533
Solyc12g095890.1.1
Uncharacterized protein (607 aa)
     
 
  0.533
Solyc08g066200.2.1
Uncharacterized protein (787 aa)
     
 
  0.533
Solyc06g066470.2.1
Uncharacterized protein (473 aa)
     
 
  0.533
Solyc05g008630.2.1
Uncharacterized protein (682 aa)
     
 
  0.533
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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