STRINGSTRING
Solyc06g051930.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g051930.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g051930.2.1Uncharacterized protein (756 aa)    
Predicted Functional Partners:
Solyc10g085550.1.1
Enolase (444 aa)
   
  0.995
Solyc10g045050.1.1
Uncharacterized protein (107 aa)
   
  0.995
PGH1
Enolase (444 aa)
   
  0.995
Solyc06g076650.2.1
Uncharacterized protein (473 aa)
   
  0.995
Solyc12g014380.1.1
Glucose-6-phosphate isomerase (568 aa)
   
 
  0.970
GPI
Glucose-6-phosphate isomerase (617 aa)
   
 
  0.970
Solyc12g035870.1.1
Uncharacterized protein (398 aa)
   
 
  0.970
ldh
L-lactate dehydrogenase (350 aa)
   
  0.969
LeLdh1
L-lactate dehydrogenase (347 aa)
   
  0.969
ME1
NADP-dependent malic enzyme, chloroplastic ; The chloroplastic ME isoform decarboxylates malate shuttled from neighboring mesophyll cells. The CO(2) released is then refixed by ribulose-bisphosphate carboxylase. This pathway eliminates the photorespiratory loss of CO(2) that occurs in most plants (640 aa)
   
  0.964
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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