STRINGSTRING
Solyc06g052080.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g052080.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g052080.2.1Uncharacterized protein (207 aa)    
Predicted Functional Partners:
Solyc02g094410.2.1
Uncharacterized protein (625 aa)
           
  0.422
Solyc01g009820.2.1
Uncharacterized protein (632 aa)
           
  0.422
TCP3
SlTCP3; TCP transcription factor 3 (394 aa)
           
  0.410
Solyc11g066490.1.1
Uncharacterized protein (208 aa)
           
  0.410
TCP24
TCP transcription factor 24 (387 aa)
           
  0.410
Solyc08g048370.2.1
Uncharacterized protein (326 aa)
           
  0.410
Solyc04g010050.2.1
Uncharacterized protein (565 aa)
           
  0.410
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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