STRINGSTRING
Solyc06g053320.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g053320.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g053320.2.1Uncharacterized protein (882 aa)    
Predicted Functional Partners:
Solyc07g039550.2.1
Uncharacterized protein (1190 aa)
     
  0.952
Solyc01g110990.2.1
Uncharacterized protein (1111 aa)
     
  0.952
Solyc09g090660.2.1
Uncharacterized protein (521 aa)
     
  0.930
Solyc03g117940.2.1
Uncharacterized protein (286 aa)
       
  0.922
Solyc02g078970.2.1
Uncharacterized protein (570 aa)
       
  0.906
Solyc02g076720.2.1
Uncharacterized protein (1459 aa)
   
      0.903
Solyc01g107270.2.1
Uncharacterized protein (1333 aa)
   
      0.903
Solyc01g094540.2.1
Small nuclear ribonucleoprotein-associated protein (280 aa)
     
  0.901
cdc5
CDC5-like protein (987 aa)
     
  0.901
Solyc08g074440.2.1
Uncharacterized protein (639 aa)
       
  0.898
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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