STRINGSTRING
Solyc06g053590.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g053590.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g053590.2.1Uncharacterized protein (599 aa)    
Predicted Functional Partners:
Solyc12g049410.1.1
Uncharacterized protein (1016 aa)
     
  0.974
Solyc11g073280.1.1
Uncharacterized protein (251 aa)
       
  0.938
Solyc11g011130.1.1
Uncharacterized protein (283 aa)
       
  0.938
Solyc10g086400.1.1
Uncharacterized protein (239 aa)
       
  0.938
Solyc04g014460.2.1
Uncharacterized protein (272 aa)
       
  0.938
Solyc12g009390.1.1
Uncharacterized protein (429 aa)
       
      0.935
Solyc12g099530.1.1
Uncharacterized protein (522 aa)
     
 
  0.932
Solyc01g066830.2.1
Uncharacterized protein (515 aa)
     
 
  0.932
Solyc12g035670.1.1
Uncharacterized protein (1565 aa)
     
 
  0.912
Solyc06g061120.2.1
Uncharacterized protein (417 aa)
     
 
  0.912
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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