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STRINGSTRING
THM18 protein (Solanum lycopersicum) - STRING interaction network
THM18 protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THM18THM18 protein (265 aa)    
Predicted Functional Partners:
101267632
Uncharacterized protein; Winged-helix DNA-binding transcription factor family protein (325 aa)
     
 
  0.551
101263872
annotation not available (260 aa)
     
   
  0.500
101261180
annotation not available (393 aa)
           
  0.497
101254982
Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription (138 aa)
       
 
  0.491
ICE1a
annotation not available (531 aa)
       
 
  0.456
Solyc03g118310.2.1
annotation not available (528 aa)
       
 
  0.456
101254575
Uncharacterized protein; Splicing factor-related (509 aa)
     
 
  0.419
101267475
annotation not available (291 aa)
     
   
  0.411
NAM1
Nam-like protein 1 (296 aa)
     
   
  0.411
101263464
annotation not available (521 aa)
     
 
  0.403
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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