STRINGSTRING
Solyc06g054120.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g054120.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g054120.1.1Uncharacterized protein (495 aa)    
Predicted Functional Partners:
Solyc11g065740.1.1
Uncharacterized protein (213 aa)
   
        0.528
Solyc01g079470.2.1
Uncharacterized protein (124 aa)
   
          0.520
Solyc06g009630.1.1
Uncharacterized protein (127 aa)
   
          0.519
Solyc11g044530.1.1
Uncharacterized protein (234 aa)
   
          0.517
Solyc04g080870.1.1
Uncharacterized protein (86 aa)
   
          0.517
Solyc06g084470.2.1
Uncharacterized protein (172 aa)
   
          0.515
Solyc01g104320.2.1
Uncharacterized protein (284 aa)
   
          0.515
Solyc04g049130.2.1
Uncharacterized protein (400 aa)
   
          0.514
Solyc03g098110.2.1
Uncharacterized protein (385 aa)
   
          0.514
Solyc11g005340.1.1
Uncharacterized protein (256 aa)
   
          0.513
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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