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STRINGSTRING
Solyc06g054520.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g054520.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g054520.1.1annotation not available (412 aa)    
Predicted Functional Partners:
101258168
Transcriptional adapter; Homolog of yeast ADA2 2A (560 aa)
           
  0.802
101249430
Uncharacterized protein; alpha-L-fucosidase 1 (518 aa)
           
  0.739
101265687
6-phosphogluconate dehydrogenase family protein; Belongs to the 3-hydroxyisobutyrate dehydrogenase family (344 aa)
   
 
  0.690
101246532
Transcriptional adapter; Homolog of yeast ADA2 2B (543 aa)
           
  0.662
MET
DNA (cytosine-5)-methyltransferase; Cytosine-specific methyltransferase ; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family (1559 aa)
           
  0.622
543887
annotation not available (247 aa)
           
  0.561
101255924
annotation not available (465 aa)
   
 
  0.497
101262853
Uncharacterized protein; Peroxisomal 3-keto-acyl-CoA thiolase 2; Belongs to the thiolase family (456 aa)
   
 
  0.497
101262830
annotation not available (404 aa)
   
 
  0.497
Solyc05g017760.2.1
annotation not available (407 aa)
   
 
  0.497
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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