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STRINGSTRING
Solyc06g054650.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g054650.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g054650.2.1annotation not available (400 aa)    
Predicted Functional Partners:
101253164
Protein ROOT HAIR DEFECTIVE 3 homolog; Probable GTP-binding protein that may be involved in cell development (786 aa)
       
 
  0.653
101266805
Protein ROOT HAIR DEFECTIVE 3 homolog; Probable GTP-binding protein that may be involved in cell development (815 aa)
       
 
  0.653
Solyc02g030450.2.1
Protein ROOT HAIR DEFECTIVE 3 homolog; Probable GTP-binding protein that may be involved in cell development (799 aa)
       
 
  0.653
101254688
Ubiquitin system component Cue protein (910 aa)
           
  0.558
101245773
Uncharacterized protein; Metaxin-related (326 aa)
           
  0.556
101248675
annotation not available (319 aa)
           
  0.507
Solyc06g052000.1.1
annotation not available (176 aa)
           
  0.467
101253366
annotation not available (356 aa)
           
  0.467
101253363
Inositol polyphosphate multikinase; Inositol phosphate kinase with a broad substrate specificity (367 aa)
           
  0.448
101247600
Inositol polyphosphate multikinase; Inositol phosphate kinase with a broad substrate specificity (294 aa)
           
  0.448
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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