STRINGSTRING
Solyc06g059850.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g059850.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g059850.1.1Uncharacterized protein (380 aa)    
Predicted Functional Partners:
Solyc01g028900.2.1
Uncharacterized protein (358 aa)
  0.999
Solyc01g066520.2.1
Uncharacterized protein (505 aa)
 
  0.997
Solyc08g016750.2.1
Uncharacterized protein (408 aa)
  0.989
Solyc04g008590.2.1
Uncharacterized protein (408 aa)
  0.989
Solyc05g024160.2.1
Uncharacterized protein (371 aa)
  0.988
Solyc03g097680.2.1
Uncharacterized protein (369 aa)
  0.988
Solyc06g072580.2.1
Uncharacterized protein (367 aa)
  0.988
Solyc12g099100.1.1
Dihydrolipoyl dehydrogenase (504 aa)
   
  0.983
LOC544237
Dihydrolipoyl dehydrogenase (500 aa)
   
  0.983
Solyc05g053100.2.1
Uncharacterized protein (571 aa)
   
  0.983
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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