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STRINGSTRING
Solyc06g060200.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g060200.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g060200.1.1annotation not available (126 aa)    
Predicted Functional Partners:
Solyc12g041940.1.1
annotation not available (249 aa)
   
     
  0.489
Solyc12g041950.1.1
annotation not available (103 aa)
   
     
  0.456
101245487
Uncharacterized protein; Calcium-dependent lipid-binding (CaLB domain) family protein (545 aa)
           
  0.437
Solyc07g007450.2.1
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins (164 aa)
           
  0.420
101252070
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins (166 aa)
           
  0.420
101259553
annotation not available (199 aa)
       
      0.416
101252206
Uncharacterized protein; S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (554 aa)
     
   
  0.413
101264002
Ankyrin repeat family protein (327 aa)
     
 
  0.400
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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