STRINGSTRING
101250518 protein (Solanum lycopersicum) - STRING interaction network
"101250518" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101250518annotation not available (310 aa)    
Predicted Functional Partners:
101250941
Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII) (1642 aa)
           
  0.589
101263058
Uncharacterized protein; Basic helix-loop-helix (bHLH) DNA-binding superfamily protein (357 aa)
           
  0.542
Solyc10g007570.2.1
annotation not available (190 aa)
   
     
  0.472
Solyc11g072130.1.1
annotation not available (228 aa)
   
          0.441
101244005
Uncharacterized protein; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Belongs to the iron/ascorbate-dependent oxidoreductase family (318 aa)
   
          0.422
Solyc03g117020.2.1
Stromal cell-derived factor 2-like protein precursor (369 aa)
           
  0.410
101249330
annotation not available (257 aa)
   
          0.408
101264464
annotation not available (616 aa)
           
  0.406
101262655
DNAse I-like superfamily protein (560 aa)
           
  0.406
101267738
annotation not available (243 aa)
           
  0.406
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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