STRINGSTRING
Solyc06g060960.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g060960.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g060960.1.1Uncharacterized protein (1055 aa)    
Predicted Functional Partners:
MET
Cytosine-specific methyltransferase (1559 aa)
   
  0.935
Solyc12g100330.1.1
Uncharacterized protein (933 aa)
   
  0.933
Solyc08g067070.2.1
Uncharacterized protein (381 aa)
   
  0.933
Solyc08g005400.2.1
Uncharacterized protein (1075 aa)
   
  0.933
Solyc01g067040.1.1
Uncharacterized protein (676 aa)
   
  0.933
Solyc01g006100.2.1
Uncharacterized protein (808 aa)
   
  0.933
Solyc12g035870.1.1
Uncharacterized protein (398 aa)
     
  0.909
Solyc03g033470.2.1
Uncharacterized protein (315 aa)
     
 
    0.902
Solyc01g087500.2.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1478 aa)
   
 
  0.867
Solyc12g056540.1.1
Histone H3 (136 aa)
     
  0.863
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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