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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101245957 protein (Solanum lycopersicum) - STRING interaction network
"101245957" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101245957annotation not available (559 aa)    
Predicted Functional Partners:
101245298
annotation not available (147 aa)
       
 
  0.858
Solyc05g026480.1.1
annotation not available (606 aa)
       
 
  0.629
101257476
annotation not available (149 aa)
       
 
  0.615
101255959
annotation not available (153 aa)
       
 
  0.615
Solyc11g068710.1.1
F-box family protein (201 aa)
           
  0.597
101254720
annotation not available (461 aa)
           
  0.597
101245633
DNA-binding protein (241 aa)
           
  0.597
101267746
annotation not available (295 aa)
           
  0.597
Solyc00g050430.2.1
annotation not available (343 aa)
           
  0.597
JMJ524
Uncharacterized protein; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (398 aa)
           
  0.590
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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