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STRINGSTRING
101259644 protein (Solanum lycopersicum) - STRING interaction network
"101259644" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101259644annotation not available (118 aa)    
Predicted Functional Partners:
Solyc06g076460.2.1
BTB/POZ domain-containing protein; Belongs to the SKP1 family (82 aa)
     
 
  0.965
101255836
Uncharacterized protein; Cullin-associated and neddylation dissociated (1217 aa)
       
 
  0.962
DDB1
DNA damage-binding protein 1; Component of light signal transduction machinery. Involved in fruit pigmentation and fruit nutritional quality. Acts as a negative regulator of fruit pigmentation. Probably acts by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes. Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis-promoting factors such as HY5 (1095 aa)
     
 
  0.960
101248739
annotation not available (802 aa)
     
 
  0.947
cul4
Uncharacterized protein; Cullin 4 ; Belongs to the cullin family (785 aa)
     
 
  0.947
101243776
annotation not available (183 aa)
     
 
  0.921
Solyc10g039370.1.1
annotation not available (80 aa)
     
 
  0.921
Solyc06g007500.1.1
annotation not available (262 aa)
     
 
  0.921
RCE1
Uncharacterized protein; RUB1 conjugating enzyme ; Belongs to the ubiquitin-conjugating enzyme family (183 aa)
     
 
  0.921
Solyc02g085690.2.1
annotation not available (226 aa)
     
 
  0.921
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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