STRINGSTRING
Solyc06g063410.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g063410.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g063410.2.1Uncharacterized protein (687 aa)    
Predicted Functional Partners:
clpP2
ATP-dependent Clp protease proteolytic subunit (299 aa)
 
 
  0.931
clpP
ATP-dependent Clp protease proteolytic subunit ; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (206 aa)
 
 
  0.931
Solyc02g091280.2.1
ATP-dependent Clp protease proteolytic subunit (309 aa)
 
 
  0.931
Solyc09g065790.1.1
ATP-dependent Clp protease proteolytic subunit (176 aa)
 
 
  0.930
Solyc10g049710.1.1
ATP-dependent Clp protease proteolytic subunit (384 aa)
 
 
  0.930
LOC543966
ATP-dependent Clp protease proteolytic subunit (275 aa)
 
 
  0.930
Solyc04g009310.2.1
ATP-dependent Clp protease proteolytic subunit (236 aa)
 
 
  0.930
Solyc08g079620.2.1
ATP-dependent Clp protease proteolytic subunit (289 aa)
 
 
  0.929
Solyc08g075750.2.1
ATP-dependent Clp protease proteolytic subunit (302 aa)
 
 
  0.929
Solyc08g077890.2.1
ATP-dependent Clp protease proteolytic subunit (302 aa)
 
 
  0.926
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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